Abstract：This paper analyzes SHI's acupuncture and moxibustion with the theory of warming yang and removing stagnation and its application. SHI's acupuncture and moxibustion has the characteristics of "acupuncture first， followed by moxibustion， and then medication， advocating the combination of acupuncture，moxibustion and medicine". SHI's acupuncture and moxibustion uses the theory of warming yang and removing stagnation to diagnose and treat diseases. It is believed that the treatment should take warming yang as the priority， and the effect of warming yang should be achieved through acupoint selection and moxibustion. The acupoint selection should pay attention to the nature of acupoints，the use of he-points，and the use of acupoints on the governer vessel should be emphasized. Moxibustion includes moxibustion with seed-sized moxa cone，sulfur moxibustion，and medicinal cake seperated moxibustion. At the same time as warming yang，it is also advisable to remove stagnation；in clinical practice，methods such as needle insertion， needling manipulation， the use of shu-stream points， and warm needling are used. SHI holds that acupuncture and needling stone treat disease from the outside and the medicine treat disease from the inside. It advocates the combination of acupuncture， moxibustion， and medicine. According to the syndrome differentiation，the medicinals of warming yang and removing stagnation can be selected as appropriate.