基于网络药理学和分子对接技术探讨车前草治疗银屑病的潜在作用机制
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R285

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云南省科技厅科技计划项目(202301BA070001-133,202301AT070043);大理大学博士科研启动费项目(KYBS2021101)


Exploration of Potential Mechanism of Plantaginis Herba in Treating Psoriasis Based on Network Pharmacology and Molecular Docking Technology
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    摘要:

    目的:基于网络药理学和分子对接技术探讨车前草治疗银屑病的潜在作用机制。方法:通过中药 系统药理学数据库与分析平台(TCMSP)、中医药整合药理学研究平台(TCMIP) 和SwissTargetPrediction数据 库筛选车前草的活性成分及靶点基因;利用Disgenet、GeneCards、TTD和在线人类孟德尔遗传(OMIM) 数据 库检索银屑病的疾病相关靶点基因;将筛选出的车前草靶点基因与银屑病疾病相关靶点基因取交集,获得车前 草-交集靶点基因,制作药物-疾病交集靶点基因韦恩图。应用Cytoscape3.9.1软件绘制车前草活性成分-交集靶 点基因网络图,在蛋白质相互作用(PPI) 关系(STRING) 数据库中构建PPI网络,再运用Cytoscape3.9.1软件 筛选PPI网络的核心靶点。利用DAVID数据库进行基因本体(GO) 功能富集分析和京都基因与基因组百科全 书(KEGG) 信号通路富集分析,构建药物活性成分-疾病-靶点-通路网络。最后利用Autodocktools1.5.7软件 对车前草主要活性成分与车前草治疗银屑病的核心靶点进行分子对接验证。结果:获得车前草活性成分靶点基 因400个,银屑病疾病靶点基因4 893个,车前草-银屑病交集靶点基因186个。PPI网络分析提示肿瘤抑制蛋 白53(TP53)、丝氨酸/苏氨酸蛋白激酶1(AKT1) 和丝裂原活化蛋白激酶1(MAPK1) 等靶点是车前草治疗银 屑病的核心靶点。核心靶点-车前草活性成分网络图显示,绿原酸、高车前素、黄芩苷和木犀草素可能为车前 草治疗银屑病的关键活性成分。GO功能富集分析结果显示,车前草治疗银屑病可能通过影响炎症反应、细胞 凋亡过程的正负调控、对脂多糖的反应、蛋白质磷酸化等生物过程发挥作用。KEGG通路富集分析结果显示, 磷脂酰肌醇3激酶-蛋白激酶B(PI3K-AKT)、MAPK和白细胞介素-17(IL-17) 等信号通路是车前草治疗银屑 病的重要信号通路。分子对接结果显示,车前草主要活性成分绿原酸、高车前素、黄芩苷、木犀草素与核心靶 点TP53、AKT1、MAPK1、热休克蛋白90α家族A类成员1 (HSP90AA1)、肿瘤坏死因子(TNF) 具有较高的 亲和力。结论:车前草中的绿原酸、高车前素、黄芩苷和木犀草素等成分可能通过TP53、AKT1、MAPK1等多 靶点调控PI3K-AKT、MAPK、IL-17等信号通路,进而影响银屑病的炎症反应、细胞凋亡等生理过程,发挥治 疗银屑病的作用。

    Abstract:

    Abstract: Objective: To explore the potential mechanism of Plantaginis Herba in treating psoriasis based on network pharmacology and molecular docking technology. Methods: The active ingredients and target genes of Plantaginis Herba were screened through Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP),Integrative Pharmacology-based Research Platform of Traditional Chinese Medicine (TCMIP) and SwissTargetPrediction database. The disease-related target genes of psoriasis were retrieved by using databases of the Disease Gene Network (Disgenet), GeneCards, Therapeutic Target Database (TTD) and Online Mendelian Inheritance in Man (OMIM);the intersection of the screened target genes of Plantaginis Herba and the disease-related target genes of psoriasis was taken to obtain the Plantaginis Herba-psoriasis intersection target genes to make the Venn diagram of the drug-disease intersection target genes. Using Cytoscape 3.9.1 software, the gene network diagram of active ingredients of Plantaginis Herba-psoriasis intersection target genes. The protein-protein interaction (PPI) network was constructed in the Search Tool for the Retrieval of Interacting Genes (STRING) database,and Cytoscape 3.9.1 software was used to screen the core targets of the PPI network. The Database for Annotation,Visualization and Integrated Discovery (DAVID) database was used for Gene Ontology (GO) functional enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) signaling pathway enrichment analysis,and the drug active componentsdisease- targets-pathways network was established. Finally,Autodocktools 1.5.7 software was used to conduct molecular docking verification of the main active ingredients of Plantaginis Herba and the core targets of Plantaginis Herba in treating psoriasis. Results: A total of 400 target genes of active ingredients of Plantaginis Herba, 4 893 diseaserelated target genes of psoriasis,and 186 Plantaginis Herba-psoriasis intersection target genes were identified. The PPI network analysis suggested that targets such as tumor protein 53 (TP53),AKT serine/threonine kinase 1 (AKT1) and mitogen-activated protein kinase 1( MAPK1) are the core targets of Plantaginis Herba in the treatment of psoriasis. Core targets-Plantaginis Herba active ingredient network map showed that Chlorogenic Acid, Dinatin, Baicalein, and Luteolin may be the key active ingredients of Plantaginis Herba in the treatment of psoriasis. The results of GO functional enrichment analysis showed that Plantaginis Herba may play a role in the treatment of psoriasis by affecting biological processes such as inflammatory responses, positive and negative regulation of the apoptotic process, response to lipopolysaccharide, and protein phosphorylation. The results of KEGG enrichment analysis indicated that signaling pathways such as phosphatidylinositol 3-kinase/protein kinase B (PI3K-AKT), MAPK and interleukin-17 (IL-17) are important signaling pathways for Plantaginis Herba in treating psoriasis. Molecular docking results showed that the main active ingredients of Plantaginis Herba,including Chlorogenic Acid,Dinatin,Baicalein,and Luteolin,have a higher affinity for core targets TP53, AKT1, MAPK1, heat shock protein 90 alpha family class A member 1 (HSP90AA1), and tumor necrosis factor (TNF). Conclusion: The Chlorogenic Acid, Dinatin, Baicalein, and Luteolin in Plantaginis Herba may regulate the signaling pathways of PI3K-AKT,MAPK and IL-17 through multiple targets such as TP53, AKT1, and MAPK1, thereby affecting the physiological processes of inflammatory responses and apoptosis in patients with psoriasis,and playing a role in the treatment of psoriasis.

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李晴欢,孙能,王东娜,汤雯艳,李帅,曹开美,余双颖,朱家丽.基于网络药理学和分子对接技术探讨车前草治疗银屑病的潜在作用机制[J].新中医,2025,57(8):144-155

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  • 在线发布日期: 2025-04-27
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