基于网络药理学及分子对接分析抗风湿方治疗慢性肾小球肾炎作用机制
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R285

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第五批全国中医临床优秀人才研修项目(国中医药人教函〔2022〕1号);福建省中医临床重点专科建设项目(闽卫医政函〔2023〕1163号)


Analysis of Action Mechanism of Kangfengshi Prescription in Treating Chronic Glomerulonephritis Based on Network Pharmacology and Molecular Docking
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    摘要:

    目的:基于网络药理学及分子对接技术分析抗风湿方治疗慢性肾小球肾炎(CGN) 作用机制。 方法:通过中药系统药理学数据库与分析平台(TCMSP) 收集抗风湿方药物活性成分及作用靶点;应用 GeneCards、PharmGkb和OMIM数据库构建CGN疾病靶点集;通过Cytoscape软件构建“中药-化合物-靶点”网 络,并将抗风湿方潜在靶点与疾病靶点取交集以获取核心靶点,通过STRING平台构建蛋白质互作(PPI) 网 络;借助生物信息资源数据库对核心靶点进行基因本体(GO) 功能和京都基因与基因组百科全书(KEGG) 通 路富集分析,并构建“靶点-信号通路”核心通路图。采用分子对接验证预测靶点与活性成分能否实际结合。 结果:筛选得到抗风湿方作用于CGN 疾病靶点105 个,核心靶点有白细胞介素(IL) -6、肿瘤坏死因子 (TNF)、趋化因子配体2(CCL2)、IL-1β、核转录因子(NF) -κB p65亚基(RELA)、蛋白激酶B1(AKT1)、 肿瘤蛋白p53(TP53)、雌激素受体α(ESR1)、转录因子AP-1亚基JUN及FOS。GO功能分析主要涉及对脂多糖 的反应、对细菌分子的反应、对活性氧的反应和对氧化应激的反应;KEGG通路富集主要涉及磷脂酰肌醇3-激 酶(PI3K) -蛋白激酶B(AKT)、糖尿病并发症中的晚期糖基化终末产物及其受体(AGE-RAGE)、丝裂原活 化蛋白激酶(MAPK)、脂质和动脉粥样硬化等信号通路。分子对接显示核心靶点与核心活性成分有良好的结 合活性。结论:抗风湿方可能通过槲皮素、山奈酚等活性成分作用于TP53、AKT1等靶点,通过PI3K-AKT、 糖尿病并发症中的AGE-RAGE、MAPK、脂质和动脉粥样硬化等信号通路治疗CGN。

    Abstract:

    Abstract: Objective: To analyze the action mechanism of Kangfengshi Prescription in treating chronic glomerulonephritis (CGN) based on network pharmacology and molecular docking techniques. Methods: Active components and targets of Kangfengshi Prescription were collected using the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform(TCMSP). CGN disease targets were constructed using the GeneCards, PharmGkb, and OMIM databases. A "Chinese medicine-compound-target" network was constructed by Cytoscape software, and the intersection of potential targets of Kangfengshi Prescription and disease targets was obtained to identify core targets. A protein-protein interaction(PPI) network was constructed by the STRING platform; Gene Ontology(GO)functional and Kyoto Encyclopedia of Genes and Genomes(KEGG)pathway enrichment analyses of core targets were performed by bioinformatics resource databases, and constructed a "target-signaling pathway" core pathway map. Molecular docking was used to verify the binding ability of predicted targets and active components. Results:A total of 105 CGN disease targets were identified for Kangfengshi Prescription,with core targets including interleukin(IL)-6,tumor necrosis factor(TNF),chemokine ligand 2(CCL2),IL-1β,nuclear factor(NF)-κB p65 subunit(RELA), protein kinase B1(AKT1), tumor protein p53(TP53), estrogen receptor α(ESR1), transcription factor AP-1 subunits JUN and FOS. GO functional analysis mainly involved responses to lipopolysaccharide, bacterial molecules, reactive oxygen species, and oxidative stress; KEGG pathway enrichment mainly involved phosphatidylinositol 3-kinase(PI3K)-protein kinase B(AKT), advanced glycation end productsreceptor (AGE-RAGE) in diabetic complications, mitogen-activated protein kinase (MAPK), and lipid and atherosclerosis signaling pathways. Molecular docking showed good binding activity between core targets and core active components. Conclusion: Kangfengshi Prescription can treat CGN through active components such as quercetin and kaempferol acting on targets like TP53 and AKT1,and through signaling pathways such as PI3K-AKT,AGE-RAGE in diabetic complications,MAPK,and lipid and atherosclerosis.

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熊莉莉,苏启航,林威,苏雨田,邱模炎,许正锦.基于网络药理学及分子对接分析抗风湿方治疗慢性肾小球肾炎作用机制[J].新中医,2025,57(19):172-178

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  • 在线发布日期: 2025-10-20
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