基于网络药理学和分子对接技术分析二陈汤治疗肝癌作用机制
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河南省科技攻关项目(252102310302)


Analysis of the Mechanism of Erchen Decoction in Treating Liver Cancer Based on Network Pharmacology and Molecular Docking Technology
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    摘要:

    目的:采用网络药理学和分子对接技术分析二陈汤治疗肝癌的作用机制。方法:通过中药系统药 理学数据库与分析平台(TCMSP) 筛选二陈汤的活性成分,使用Swiss Target Prediction数据库获取活性成分相 关靶点。在GeneCards、OMIM和DrugBank数据库筛选肝癌的相关靶点。使用Venny 2.1.0获取二陈汤活性成分 靶点与肝癌靶点的交集靶点。应用STRING 数据库建立交集靶点蛋白质相互作用(PPI) 网络图, 采用 Cytoscape 3.10.2软件建立核心靶点PPI网络图。采用Cytoscape 3.10.2软件构建“中药-活性成分-靶点”网络。 对核心靶点进行基因本体(GO) 功能和京都基因与基因组百科全书(KEGG) 通路富集分析。应用 AutoDockTools 1.5.7软件进行活性成分和关键靶点的分子对接。结果:从二陈汤中获得130个活性成分及其潜在 作用靶点966个。肝癌疾病筛选得到肝癌相关靶点1 020个。活性成分和疾病交集靶点225个,核心靶点53个。 筛选得到二陈汤主要活性成分为槲皮素-3,3′-二甲醚、槲皮素、黄芩素、啤酒甾醇、5,7-二羟基-2-(3-羟基-4- 甲氧基苯基) 苯并二氢吡喃-4-酮(R-橙皮素)、6-甲基姜辣二醇双乙酸酯。筛选出核心靶点为信号传导和转 录激活因子3(STAT3)、肉瘤病毒蛋白(SRC)、雌激素受体1(ESR1)、丝氨酸/苏氨酸激酶1(AKT1)、磷酸 肌醇3-激酶调节亚基1(PIK3R1)、表皮生长因子受体(EGFR)、信号传导和转录激活因子1(STAT1)。GO富 集分析显示核心靶点主要参与染色质重塑、凋亡过程负向调控等多个生物学过程。KEGG富集分析显示核心靶 点主要参与癌症通路、EGFR酪氨酸激酶抑制剂耐药性等通路。分子对接结果显示关键靶点与二陈汤中主要活 性成分结合稳定。结论:网络药理学分析结果显示,二陈汤可通过槲皮素-3,3′-二甲醚、槲皮素、黄芩素、 啤酒甾醇、R-橙皮素、6-甲基姜辣二醇双乙酸酯等活性成分,作用于STAT3、SRC、ESR1、AKT1、PIK3R1、 EGFR、STAT1等靶点,调控多种通路发挥治疗肝癌的作用。

    Abstract:

    Abstract: Objective: To analyze the mechanism of Erchen Decoction in the treatment of liver cancer using network pharmacology and molecular docking technology. Methods: Active ingredients of Erchen Decoction were screened using the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP). Potential targets of these active ingredients were retrieved from the Swiss Target Prediction database. Liver cancer- related targets were collected from the GeneCards,OMIM,and DrugBank databases. Venny 2.1.0 was used to identify overlapping targets between the active ingredients and liver cancer. A protein-protein interaction (PPI) network of the overlapping targets was constructed using the STRING database, and core targets were identified using Cytoscape 3.10.2. A "herb-active ingredient-target" network was also established using Cytoscape 3.10.2. Gene Ontology (GO) functional enrichment and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed on the core targets. Molecular docking of key active ingredients and core targets was conducted using AutoDockTools 1.5.7. Results: A total of 130 active ingredients and 966 potential targets were identified from Erchen Decoction. Screening yielded 1 020 liver cancer-related targets. There were 225 overlapping targets between the active ingredients and the disease,of which 53 were identified as core targets. The main active ingredients of Erchen Decoction included quercetin-3,3′-dimethyl ether, quercetin, baicalein, cerevisterol, 5, 7-dihydroxy-2-(3- hydroxy-4-methoxyphenyl)chroman-4-one (R-hesperetin), and 6-methylgingediol diacetate. The main targets are signal transducer and activator of transcription 3 (STAT3), sarcoma virus protein (SRC), estrogen receptor 1 (ESR1), AKT serine/threonine kinase 1 (AKT1), phosphoinositol 3-kinase regulatory subunit 1 (PIK3R1), epidermal growth factor receptor (EGFR), and signal transducer and activator of transcription 1 (STAT1) . GO enrichment analysis indicated that the core targets were primarily involved in biological processes such as chromatin remodeling and negative regulation of apoptosis. KEGG enrichment analysis showed that the core targets were mainly associated with pathways in cancer and EGFR tyrosine kinase inhibitor resistance. Molecular docking results demonstrated stable binding between the key targets and the main active ingredients of Erchen Decoction. Conclusion: Network pharmacology analysis results indicate that Erchen Decoction may have potential therapeutic effects against liver cancer, likely through active ingredients such as quercetin-3, 3′-dimethyl ether, quercetin, baicalein, cerevisterol, R-hesperetin, and 6-methylgingediol diacetate acting on targets including STAT3, SRC, ESR1,AKT1,PIK3R1,EGFR,and STAT1 to regulate multiple pathways.

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王业民,郑凯凯,孙艳朝,张蔓莉,张志亮.基于网络药理学和分子对接技术分析二陈汤治疗肝癌作用机制[J].新中医,2026,58(3):143-151

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  • 在线发布日期: 2026-02-08
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