基于网络药理学和分子对接技术分析天麻钩藤饮异病同治帕金森病、阿尔茨海默病和脑梗死的作用机制
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Analysis of Mechanism of Tianma Gouteng Yin in Treating Parkinson's Disease, Alzheimer's Disease,and Cerebral Infarction Based on the Treating Different Diseases with the Same Method Principle Using Network Pharmacology and Molecular Docking Technology
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    目的:基于网络药理学、分子对接技术以及分子动力学模拟技术分析天麻钩藤饮治疗帕金森病(PD)、阿尔茨海默病(AD) 和脑梗死(CI) 的作用机制。方法:通过中药系统药理学数据库及分析平台(TCMSP)、HERB数据库和PubChem平台对天麻钩藤饮药物活性成分和对应靶点进行预测,以全面获取相关靶点蛋白。本研究分别从GeneCards、DrugBank以及OMIM数据库系统收集疾病靶点。随后,提取药物与疾病交集靶点,并绘制韦恩图,以展示药物靶点与疾病靶点的重叠情况。随后,在STRING平台上构建蛋白质相互作用(PPI) 网络,通过Cytoscape进行可视化与拓扑分析。针对筛选出的核心靶点,在不同器官组织中检索其分布信息,进而构建关键靶点与器官组织的网络关系图。借助DAVID数据库平台对潜在靶点进行基因本体(GO) 功能以及京都基因与基因组百科全书(KEGG) 通路富集分析。基于上述分析结果,进一步遴选药物的主要活性成分和疾病的核心靶点,运用AutoDock Vina软件开展分子对接验证,并对优选复合物进行分子动力学模拟评估结合稳定性。结果:筛选到天麻钩藤饮药物有效活性成分181个,对应靶点386个。获得PD、AD、CI疾病靶点分别为3 040、2 403、2 126个,药物疾病交集靶点131个。获得关键活性成分为表儿茶素、槲皮素、豆甾醇、β-谷甾醇、山柰酚。PPI网络分析发现蛋白激酶B(AKT) 1、白细胞介素(IL) -6、肿瘤坏死因子(TNF)、IL-1β、肿瘤蛋白p53(TP53) 等是天麻钩藤饮治疗AD、PD和CI的潜在核心靶点。KEGG分析主要涉及动脉粥样硬化、TNF、糖尿病并发症中的晚期糖基化终末产物-受体(AGE-RAGE) 以及IL-17等信号通路。分子对接主要活性成分与核心靶点结合良好,分子动力学模拟进一步证实了复合物的构象稳定性。结论:网络药理学分析结果提示天麻钩藤饮可能通过槲皮素、β-谷甾醇等主要活性成分,作用于AKT1、IL-6、TNF等与神经炎症及细胞应激密切相关的通用靶点,调控TNF、IL-17信号通路及脂质代谢等共享信号通路,从“抗炎-代谢调节-神经保护”这一共性环节干预PD、AD与CI的病理过程。

    Abstract:

    Abstract:Objective:To analyze the mechanism of Tianma Gouteng Yin in treating Parkinson's disease (PD), Alzheimer's disease( AD),and cerebral infarction( CI) based on network pharmacology,molecular docking technology, and molecular dynamics simulation. Methods:The active ingredients and corresponding targets of Tianma Gouteng Yin were predicted using the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform( TCMSP), the HERB database,and the PubChem platform to comprehensively obtain relevant target proteins. Disease targets were systematically collected from GeneCards, DrugBank, and OMIM databases. Intersecting targets between drugs and diseases were extracted, and a Venn diagram was constructed to visualize the overlap. A protein-protein interaction (PPI) network was then constructed on the STRING platform, followed by visualization and topological analysis using Cytoscape. For the screened core targets, their distribution across different organs and tissues was retrieved to construct a network relationship diagram between key targets and organ tissues. Gene Ontology (GO) functional enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis were performed on potential targets using the DAVID database. Based on the above analysis,key active ingredients of the formula and core disease targets were further selected, and molecular docking simulations were conducted using AutoDock Vina. Molecular dynamics simulations were also performed on selected complexes to assess binding stability. Results:A total of 181 active ingredients of Tianma Gouteng Yin were screened,corresponding to 386 targets. A total of 3 040,2 403,and 2 126 targets were obtained for PD,AD,and CI,respectively,with 131 intersecting targets. The main active ingredients obtained were epicatechin, quercetin, stigmasterol, β-sitosterol, and kaempferol. The PPI network analysis identified AKT serine/threonine kinase 1 (AKT1), interleukin-6 (IL-6), tumor necrosis factor (TNF),interleukin-1β (IL-1β),and tumor protein p53 (TP53) as potential core targets of Tianma Gouteng Yin in treating AD, PD, and CI. The KEGG analysis primarily involved signaling pathways such as atherosclerosis, TNF, advanced glycation end products-receptor for advanced glycation end products (AGE-RAGE) in diabetic complications, and interkeukin-17(IL-17). Molecular docking demonstrated favorable binding between core components and targets, and molecular dynamics simulations further confirmed the conformational stability of the complexes. Conclusion: Network pharmacology analysis suggests that Tianma Gouteng Yin may act through core components such as quercetin and β-sitosterol on common targets closely related to neuroinflammation and cellular stress,including AKT1,IL-6,and TNF,thereby regulating shared signaling pathways such as TNF,IL-17,and lipid metabolism. It may intervene in the pathological processes of PD,AD,and CI through a common mechanism of "anti-inflammation,metabolic regulation,and neuroprotection."

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王佳怡,马传钰,王明原,刘建仁.基于网络药理学和分子对接技术分析天麻钩藤饮异病同治帕金森病、阿尔茨海默病和脑梗死的作用机制[J].新中医,2026,58(19):235-245

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  • 在线发布日期: 2026-10-16
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